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NAR Top Articles - Computational Biology

Computational Biology

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August 2016


The use of interatomic contact areas to quantify discrepancies between RNA 3D models and reference structures
Olechnovic, K; Venclovas, C
Nucleic Acids Res. 2014, 42, 5407-5415
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Computational Biology
Microbial species delineation using whole genome sequences
Varghese, Neha J.; Mukherjee, Supratim; Ivanova, Natalia; Konstantinidis, Konstantinos T.; Mavrommatis, Kostas; Kyrpides, Nikos C.; Pati, Amrita
Nucleic Acids Res. 2015, 43, 6761-6771
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Pathway analysis from lists of microRNAs: common pitfalls and alternative strategy
Godard, Patrice; van Eyll, Jonathan
Nucleic Acids Res. 2015, 43, 3490-3497
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Accurate multiplexing and filtering for high-throughput amplicon-sequencing
Esling, Philippe; Lejzerowicz, Franck; Pawlowski, Jan
Nucleic Acids Res. 2015, 43, 2513-2524
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Detection of recurrent alternative splicing switches in tumor samples reveals novel signatures of cancer
Sebestyen, Endre; Zawisza, Michal; Eyras, Eduardo
Nucleic Acids Res. 2015, 43, 1345-1356
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Genomes to natural products PRediction Informatics for Secondary Metabolomes (PRISM)
Skinnider, Michael A.; Dejong, Chris A.; Rees, Philip N.; Johnston, Chad W.; Li, Haoxin; Webster, Andrew L. H.; Wyatt, Morgan A.; Magarvey, Nathan A.
Nucleic Acids Res. 2015, 43, 9645-9662
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Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer
Wang, Peng; Ning, Shangwei; Zhang, Yunpeng; Li, Ronghong; Ye, Jingrun; Zhao, Zuxianglan; Zhi, Hui; Wang, Tingting; Guo, Zheng; Li, Xia
Nucleic Acids Res. 2015, 43, 3478-3489
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Spatial confinement is a major determinant of the folding landscape of human chromosomes
Gursoy, G; Xu, Y; Kenter, AL; Liang, J
Nucleic Acids Res. 2014, 42, 8223-8230
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Modeling the relationship of epigenetic modifications to transcription factor binding
Liu, Liang; Jin, Guangxu; Zhou, Xiaobo
Nucleic Acids Res. 2015, 43, 3873-3885
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Assembly and analysis of eukaryotic Argonaute-RNA complexes in microRNA-target recognition
Gan, Hin Hark; Gunsalus, Kristin C.
Nucleic Acids Res. 2015, 43, 9613-9625
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