Skip Navigation

NAR Top Articles - Computational Biology

Computational Biology

View all categories

June 2016


Associations between intronic non-B DNA structures and exon skipping
Tsai, ZTY; Chu, WY; Cheng, JH; Tsai, HK
Nucleic Acids Res. 2014, 42, 739-747
Free Full Text

Microbial species delineation using whole genome sequences
Varghese, Neha J.; Mukherjee, Supratim; Ivanova, Natalia; Konstantinidis, Konstantinos T.; Mavrommatis, Kostas; Kyrpides, Nikos C.; Pati, Amrita
Nucleic Acids Res. 2015, 43, 6761-6771
Free Full Text

Pathway analysis from lists of microRNAs: common pitfalls and alternative strategy
Godard, Patrice; van Eyll, Jonathan
Nucleic Acids Res. 2015, 43, 3490-3497
Free Full Text

Accurate multiplexing and filtering for high-throughput amplicon-sequencing
Esling, Philippe; Lejzerowicz, Franck; Pawlowski, Jan
Nucleic Acids Res. 2015, 43, 2513-2524
Free Full Text

Genomes to natural products PRediction Informatics for Secondary Metabolomes (PRISM)
Skinnider, Michael A.; Dejong, Chris A.; Rees, Philip N.; Johnston, Chad W.; Li, Haoxin; Webster, Andrew L. H.; Wyatt, Morgan A.; Magarvey, Nathan A.
Nucleic Acids Res. 2015, 43, 9645-9662
Free Full Text

Modeling the relationship of epigenetic modifications to transcription factor binding
Liu, Liang; Jin, Guangxu; Zhou, Xiaobo
Nucleic Acids Res. 2015, 43, 3873-3885
Free Full Text

A predictive modeling approach for cell line-specific long-range regulatory interactions
Roy, Sushmita; Siahpirani, Alireza Fotuhi; Chasman, Deborah; Knaack, Sara; Ay, Ferhat; Stewart, Ron; Wilson, Michael; Sridharan, Rupa
Nucleic Acids Res. 2015, 43, 8694-8712
Free Full Text

Detection of recurrent alternative splicing switches in tumor samples reveals novel signatures of cancer
Sebestyen, Endre; Zawisza, Michal; Eyras, Eduardo
Nucleic Acids Res. 2015, 43, 1345-1356
Free Full Text

Reconstructing genome-scale metabolic models with merlin
Dias, Oscar; Rocha, Miguel; Ferreira, Eugenio C.; Rocha, Isabel
Nucleic Acids Res. 2015, 43, 3899-3910
Free Full Text

Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer
Wang, Peng; Ning, Shangwei; Zhang, Yunpeng; Li, Ronghong; Ye, Jingrun; Zhao, Zuxianglan; Zhi, Hui; Wang, Tingting; Guo, Zheng; Li, Xia
Nucleic Acids Res. 2015, 43, 3478-3489
Free Full Text

Back to the top