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NAR Top Articles - Gene Regulation, Chromatin and Epigenetics

Gene Regulation, Chromatin and Epigenetics

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July 2016


Critical role for p53-serine 15 phosphorylation in stimulating transactivation at p53-responsive promoters
Loughery, J; Cox, M; Smith, LM; Meek, DW
Nucleic Acids Res. 2014, 42, 7666-7680
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Detection of G-quadruplex DNA in mammalian cells
Henderson, A; Wu, YL; Huang, YC; Chavez, EA; Platt, J; Johnson, FB; Brosh, RM; Sen, D; Lansdorp, PM
Nucleic Acids Res. 2014, 42, 860-869
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Identification of in vivo DNA-binding mechanisms of Pax6 and reconstruction of Pax6-dependent gene regulatory networks during forebrain and lens development
Sun, Jian; Rockowitz, Shira; Xie, Qing; Ashery-Padan, Ruth; Zheng, Deyou; Cvekl, Ales
Nucleic Acids Res. 2015, 43, 6827-6846
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Sense and antisense transcription are associated with distinct chromatin architectures across genes
Murray, Struan C.; Haenni, Simon; Howe, Francoise S.; Fischl, Harry; Chocian, Karolina; Nair, Anitha; Mellor, Jane
Nucleic Acids Res. 2015, 43, 7823-7837
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Systematic discovery and characterization of regulatory motifs in ENCODE TF binding experiments
Kheradpour, P; Kellis, M
Nucleic Acids Res. 2014, 42, 2976-2987
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Evidence of efficient stop codon readthrough in four mammalian genes
Loughran, G; Chou, MY; Ivanov, IP; Jungreis, I; Kellis, M; Kiran, AM; Baranov, PV; Atkins, JF
Nucleic Acids Res. 2014, 42, 8928-8938
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Identification of RNA polymerase III-transcribed Alu loci by computational screening of RNA-Seq data
Conti, Anastasia; Carnevali, Davide; Bollati, Valentina; Fustinoni, Silvia; Pellegrini, Matteo; Dieci, Giorgio
Nucleic Acids Res. 2015, 43, 817-835
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Nucleosomes undergo slow spontaneous gaping
Ngo, Thuy T. M.; Ha, Taekjip
Nucleic Acids Res. 2015, 43, 3964-3971
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ETS1 is a genome-wide effector of RAS/ERK signaling in epithelial cells
Plotnik, JP; Budka, JA; Ferris, MW; Hollenhorst, PC
Nucleic Acids Res. 2014, 42, 11928-11940
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c-Jun/c-Fos heterodimers regulate cellular genes via a newly identified class of methylated DNA sequence motifs
Gustems, M; Woellmer, A; Rothbauer, U; Eck, SH; Wieland, T; Lutter, D; Hammerschmidt, W
Nucleic Acids Res. 2014, 42, 3059-3072
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