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NAR Top Articles - Methods Online

Methods Online

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August 2016

limma powers differential expression analyses for RNA-sequencing and microarray studies
Ritchie, Matthew E.; Phipson, Belinda; Wu, Di; Hu, Yifang; Law, Charity W.; Shi, Wei; Smyth, Gordon K.
Nucleic Acids Res. 2015, 43, e47
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Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform
Schirmer, Melanie; Ijaz, Umer Z.; D'Amore, Rosalinda; Hall, Neil; Sloan, William T.; Quince, Christopher
Nucleic Acids Res. 2015, 43, e37
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Easy quantitative assessment of genome editing by sequence trace decomposition
Brinkman, EK; Chen, T; Amendola, M; van Steensel, B
Nucleic Acids Res. 2014, 42, e168
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Multiplex CRISPR/Cas9-based genome engineering from a single lentiviral vector
Kabadi, AM; Ousterout, DG; Hilton, IB; Gersbach, CA
Nucleic Acids Res. 2014, 42, e147
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Targeting non-coding RNAs with the CRISPR/Cas9 system in human cell lines
Ho, Tsui-Ting; Zhou, Nanjiang; Huang, Jianguo; Koirala, Pratirodh; Xu, Min; Fung, Roland; Wu, Fangting; Mo, Yin-Yuan
Nucleic Acids Res. 2015, 43, e17
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A novel method for the multiplexed target enrichment of MinION next generation sequencing libraries using PCR-generated baits
Karamitros T; Magiorkinis G
Nucleic Acids Res. 2015, 43, e152
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Development of a high-resolution NGS-based HLA-typing and analysis pipeline
Wittig, Michael; Anmarkrud, Jarl A.; Kaessens, Jan C.; Koch, Simon; Forster, Michael; Ellinghaus, Eva; Hov, Johannes R.; Sauer, Sascha; Schimmler, Manfred; Ziemann, Malte; Goerg, Siegfried; Jacob, Frank; Karlsen, Tom H.; Franke, Andre
Nucleic Acids Res. 2015, 43, e70
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svaseq: removing batch effects and other unwanted noise from sequencing data
Leek, JT
Nucleic Acids Res. 2014, 42, e161
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New insights into the QuikChangeTM process guide the use of Phusion DNA polymerase for site-directed mutagenesis
Xia, Yongzhen; Chu, Wenqiao; Qi, Qingsheng; Xun, Luying
Nucleic Acids Res. 2015, 43, e12
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Large-scale reconstruction of 3D structures of human chromosomes from chromosomal contact data
Trieu, T; Cheng, JL
Nucleic Acids Res. 2014, 42, e52
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