Skip Navigation

NAR Top Articles - Methods Online

Methods Online

View all categories

September 2016

limma powers differential expression analyses for RNA-sequencing and microarray studies
Ritchie, Matthew E.; Phipson, Belinda; Wu, Di; Hu, Yifang; Law, Charity W.; Shi, Wei; Smyth, Gordon K.
Nucleic Acids Res. 2015, 43, e47
Free Full Text

Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform
Schirmer, Melanie; Ijaz, Umer Z.; D'Amore, Rosalinda; Hall, Neil; Sloan, William T.; Quince, Christopher
Nucleic Acids Res. 2015, 43, e37
Free Full Text

Easy quantitative assessment of genome editing by sequence trace decomposition
Brinkman, EK; Chen, T; Amendola, M; van Steensel, B
Nucleic Acids Res. 2014, 42, e168
Free Full Text

Multiplex CRISPR/Cas9-based genome engineering from a single lentiviral vector
Kabadi, AM; Ousterout, DG; Hilton, IB; Gersbach, CA
Nucleic Acids Res. 2014, 42, e147
Free Full Text

Targeting non-coding RNAs with the CRISPR/Cas9 system in human cell lines
Ho, Tsui-Ting; Zhou, Nanjiang; Huang, Jianguo; Koirala, Pratirodh; Xu, Min; Fung, Roland; Wu, Fangting; Mo, Yin-Yuan
Nucleic Acids Res. 2015, 43, e17
Free Full Text

A novel method for the multiplexed target enrichment of MinION next generation sequencing libraries using PCR-generated baits
Timokratis Karamitros and Gkikas Magiorkinis
Nucleic Acids Res. 2015, 43, e152
Free Full Text

svaseq: removing batch effects and other unwanted noise from sequencing data
Leek, JT
Nucleic Acids Res. 2014, 42, e161
Free Full Text

Development of a high-resolution NGS-based HLA-typing and analysis pipeline
Wittig, Michael; Anmarkrud, Jarl A.; Kaessens, Jan C.; Koch, Simon; Forster, Michael; Ellinghaus, Eva; Hov, Johannes R.; Sauer, Sascha; Schimmler, Manfred; Ziemann, Malte; Goerg, Siegfried; Jacob, Frank; Karlsen, Tom H.; Franke, Andre
Nucleic Acids Res. 2015, 43, e70
Free Full Text

TELP, a sensitive and versatile library construction method for next-generation sequencing
Peng, Xu; Wu, Jingyi; Brunmeir, Reinhard; Kim, Sun-Yee; Zhang, Qiongyi; Ding, Chunming; Han, Weiping; Xie, Wei; Xu, Feng
Nucleic Acids Res. 2015, 43, e35
Free Full Text

Impact of sequencing depth in ChIP-seq experiments
Jung, YL; Luquette, LJ; Ho, JWK; Ferrari, F; Tolstorukov, M; Minoda, A; Issner, R; Epstein, CB; Karpen, GH; Kuroda, MI; Park, PJ
Nucleic Acids Res. 2014, 42, e74
Free Full Text

Back to the top